Skip to contents

Main function

Main fitting function.

run.mar()
Initiate MAR analysis
ss.mar1()
Fit a state-space MAR model using the MARSS package.
prepare.data()
Prepare data frame for MAR analysis
MAR1-package MAR1
Multivariate Autoregressive Modeling for Analysis of Community Time-Series Data

Plotting

plot(<MAR>)
Plot coefficients of a MAR model
plot(<MARtop>)
Plot coefficients of top MAR models
hist(<MARtop>)
Plot histogram of AIC values of top MAR models

Printing and Summarizing

print(<MAR>)
Print output of a MAR model
print(<MARsummary>)
Print the summary of a MAR model
summary(<MAR>)
Produce a summary of a MAR model
export.MAR()
Export all elements of a MAR object to a new directory

Data

L4.AllDates
L4 plankton abundance time-series
L4.mar
L4 plankton abundance time-series prepared for MAR modeling

Helper functions

Helper functions for users.

is.diagonal()
Test if matrix is diagonal