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marssResiduals are the objects returned by residuals.marssMLE in the package MARSS-package. It is a data frame in tibble format (but not tibble class).

standardization

  • "Cholesky" means it is standardized by the Cholesky transformation of the full variance-covariance matrix of the model and state residuals.

  • "marginal" means that the residual is standardized by its standard deviation, i.e. the square root of the value on the diagonal of the variance-covariance matrix of the model and state residuals.

type

  • "tT" means the fitted values are computed conditioned on all the data. See fitted() with type="ytT" or type="xtT".

  • "tt1" means the fitted values are computed conditioned on the data from \(t=1\) to \(t-1\). See fitted() with type="ytt1" or type="xtt1".

Author

Eli Holmes, NOAA, Seattle, USA